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Scientific Laws, Physical Constants & Taxonomy Compendium Atomic Structure, Periodic Table & Chemical Principles
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Chapter 2: Atomic Structure, Periodic Table & Chemical Principles

Chemistry explores the composition, structure, properties, and transformations of matter. This chapter provides reference standards for atomic particles, electron configurations, periodic trends, chemical bonding, reaction kinetics, the pH scale, and the fundamental gas laws.

2.1 Subatomic Particles

ParticleSymbolCharge (e)Charge (Coulombs)Rest Mass (kg)Rest Mass (amu / Da)Location
Proton$p^+$ or $^1_1\text{p}$$+1$$+1.602 \times 10^{-19}\text{ C}$$1.6726 \times 10^{-27}\text{ kg}$$1.007276\text{ u}$Atomic Nucleus
Neutron$n^0$ or $^1_0\text{n}$$0$$0\text{ C}$$1.6749 \times 10^{-27}\text{ kg}$$1.008665\text{ u}$Atomic Nucleus
Electron$e^-$ or $^0_{-1}\text{e}$$-1$$-1.602 \times 10^{-19}\text{ C}$$9.1094 \times 10^{-31}\text{ kg}$$0.0005486\text{ u}$Electron Orbitals / Cloud

2.2 Quantum Numbers & Orbital Architecture

Quantum NumberSymbolPermissible ValuesPhysical Meaning
Principal$n$$1, 2, 3, 4, \dots$Energy level and orbital size / radial distance from nucleus.
Azimuthal (Angular)$l$$0, 1, \dots, (n-1)$Orbital shape ($l=0: s\text{ [sphere]}, l=1: p\text{ [dumbbell]}, l=2: d\text{ [clover]}, l=3: f$).
Magnetic$m_l$$-l, \dots, 0, \dots, +l$Spatial orientation of the orbital in 3D coordinates.
Spin$m_s$$+\frac{1}{2}, -\frac{1}{2}$Intrinsic angular momentum (spin orientation: $\uparrow$ or $\downarrow$).

Fundamental Rules of Electron Filling

  • Aufbau Principle: Electrons occupy the lowest-energy orbitals first ($1s < 2s < 2p < 3s < 3p < 4s < 3d < 4p \dots$).
  • Pauli Exclusion Principle: No two electrons in the same atom can share identical sets of four quantum numbers ($n, l, m_l, m_s$). Each orbital holds at most 2 electrons with opposite spins.
  • Hund's Rule: Every orbital in a subshell is singly occupied with parallel spins before any orbital is doubly occupied.

2.3 Periodic Table Families & Groups

Group NumberFamily NameValence ElectronsKey PropertiesRepresentative Elements
Group 1Alkali Metals1Extremely reactive, soft, low melting points, form $+1$ cations, react violently with water.$\text{Li, Na, K, Rb, Cs}$
Group 2Alkaline Earth Metals2Highly reactive, denser than Group 1, form $+2$ cations, basic oxides.$\text{Be, Mg, Ca, Sr, Ba}$
Groups 3–12Transition MetalsVariable ($d$-block)High melting points, high electrical conductivity, multiple oxidation states, colored complexes.$\text{Fe, Cu, Ag, Au, Pt, Ni}$
Group 17Halogens7Highly electronegative, diatomic nonmetals ($\text{F}_2, \text{Cl}_2$), form $-1$ anions (halides).$\text{F, Cl, Br, I}$
Group 18Noble Gases8 (2 for He)Inert, complete valence octet, monatomic gases, extremely low chemical reactivity.$\text{He, Ne, Ar, Kr, Xe, Rn}$
$f$-Block (Period 6)LanthanidesVariableRare-earth metallic elements, magnetic properties, high electrical conductance.$\text{La, Ce, Nd, Sm, Eu}$
$f$-Block (Period 7)ActinidesVariableAll radioactive, heavy synthetic elements, nuclear fission fuels.$\text{Th, U, Pu, Am, Cm}$

2.4 Periodic Trends

Periodic PropertyLeft to Right Across a PeriodTop to Bottom Down a GroupUnderlying Nuclear Mechanism
Atomic RadiusDecreases ($\rightarrow\downarrow$)Increases ($\downarrow\uparrow$)Effective nuclear charge ($Z_{\text{eff}}$) pulls electrons closer across; added shells increase distance down.
Ionization EnergyIncreases ($\rightarrow\uparrow$)Decreases ($\downarrow\downarrow$)Higher $Z_{\text{eff}}$ binds valence electrons tighter; electron shielding weakens grip down group.
ElectronegativityIncreases ($\rightarrow\uparrow$)Decreases ($\downarrow\downarrow$)Pauling scale: Fluorine is highest ($3.98$), Francium lowest ($0.7$).
Electron AffinityGenerally increases ($\rightarrow\uparrow$)Generally decreases ($\downarrow\downarrow$)Energy released when an electron is attached to a neutral atom in gaseous state.
Metallic CharacterDecreases ($\rightarrow\downarrow$)Increases ($\downarrow\uparrow$)Propensity to lose electrons and form cations.

2.5 Chemical Bonds & Intermolecular Forces

Interaction TypeMechanismTypical Bond Energy (kJ/mol)Examples
Ionic BondElectrostatic attraction between oppositely charged ions formed by complete electron transfer ($\Delta\chi > 2.0$)$400 - 4000$$\text{NaCl}, \text{MgO}, \text{CaF}_2$
Covalent Bond (Nonpolar)Equal sharing of electron pairs between atoms with identical or near-identical electronegativities ($\Delta\chi < 0.4$)$150 - 1100$$\text{H}_2, \text{O}_2, \text{CH}_4, \text{N}_2$
Covalent Bond (Polar)Unequal electron sharing resulting in partial charges ($\delta^+, \delta^-$) where $0.4 \le \Delta\chi \le 2.0$$200 - 800$$\text{H}_2\text{O}, \text{HCl}, \text{NH}_3$
Metallic BondDelocalized "sea of electrons" surrounding stationary positive metal cation lattices$100 - 800$$\text{Fe, Cu, Al, Au}$
Hydrogen BondDipole-dipole attraction between $\text{H}$ covalently bonded to highly electronegative $\text{N, O, F}$ and adjacent lone pair$10 - 40$Water hydrogen bonding, DNA base pairs
Dipole-Dipole ForceElectrostatic attraction between permanent molecular dipole moments in polar molecules$5 - 25$$\text{SO}_2, \text{HCl}$ (liquid phase)
London Dispersion ForceTemporary, induced instantaneous dipoles present in all molecules (dominant in nonpolar substances)$0.05 - 40$$\text{He, Ar}, \text{CH}_4, \text{I}_2$

2.6 Chemical Reaction Classification & Stoichiometry

Reaction ClassGeneral FormArchetypal Example
Synthesis (Combination)$A + B \rightarrow AB$$2\text{H}_2(g) + \text{O}_2(g) \rightarrow 2\text{H}_2\text{O}(l)$
Decomposition$AB \rightarrow A + B$$2\text{H}_2\text{O}_2(aq) \rightarrow 2\text{H}_2\text{O}(l) + \text{O}_2(g)$
Single Replacement$A + BC \rightarrow B + AC$$\text{Zn}(s) + 2\text{HCl}(aq) \rightarrow \text{ZnCl}_2(aq) + \text{H}_2(g)$
Double Replacement (Metathesis)$AB + CD \rightarrow AD + CB$$\text{AgNO}_3(aq) + \text{NaCl}(aq) \rightarrow \text{AgCl}(s)\downarrow + \text{NaNO}_3(aq)$
Combustion$\text{C}_x\text{H}_y + \left(x + \frac{y}{4}\right)\text{O}_2 \rightarrow x\text{CO}_2 + \frac{y}{2}\text{H}_2\text{O}$$\text{CH}_4(g) + 2\text{O}_2(g) \rightarrow \text{CO}_2(g) + 2\text{H}_2\text{O}(g) + \Delta H$
Neutralization (Acid-Base)$\text{Acid} + \text{Base} \rightarrow \text{Salt} + \text{Water}$$\text{HCl}(aq) + \text{NaOH}(aq) \rightarrow \text{NaCl}(aq) + \text{H}_2\text{O}(l)$

2.7 Acids, Bases & The pH Scale

TheoryAcid DefinitionBase Definition
ArrheniusProduces hydrogen ions ($\text{H}^+$ / $\text{H}_3\text{O}^+$) in aqueous solutionProduces hydroxide ions ($\text{OH}^-$) in aqueous solution
Brønsted-LowryProton donor ($\text{H}^+$ donor)Proton acceptor ($\text{H}^+$ acceptor)
LewisElectron-pair acceptor (electrophile)Electron-pair donor (nucleophile)

Quantitative pH Equations (at $25^\circ\text{C}$ / $298\text{K}$)

$$\text{pH} = -\log_{10}[\text{H}^+] \qquad \text{pOH} = -\log_{10}[\text{OH}^-] \qquad \text{pH} + \text{pOH} = 14$$

$$\text{Ion-Product Constant of Water: } K_w = [\text{H}^+][\text{OH}^-] = 1.0 \times 10^{-14}$$

$$\text{Henderson-Hasselbalch Buffer Equation: } \text{pH} = \text{p}K_a + \log_{10}\left(\frac{[\text{A}^-]}{[\text{HA}]}\right)$$

2.8 Fundamental Gas Laws

Law NameEquationConstant VariablesPhysical Principle
Boyle's Law$P_1 V_1 = P_2 V_2$$T, n$ (Isothermal)Pressure is inversely proportional to volume.
Charles's Law$\frac{V_1}{T_1} = \frac{V_2}{T_2}$$P, n$ (Isobaric)Volume is directly proportional to absolute temperature ($K$).
Gay-Lussac's Law$\frac{P_1}{T_1} = \frac{P_2}{T_2}$$V, n$ (Isochoric)Pressure is directly proportional to absolute temperature.
Avogadro's Law$\frac{V_1}{n_1} = \frac{V_2}{n_2}$$P, T$Equal gas volumes at constant $P, T$ contain identical particle counts.
Combined Gas Law$\frac{P_1 V_1}{T_1} = \frac{P_2 V_2}{T_2}$$n$Simultaneous variations of $P, V,$ and $T$ for a closed sample.
Ideal Gas Law$PV = nRT$Unifies gas dynamics; $R = 0.08206\text{ L}\cdot\text{atm/mol}\cdot\text{K} = 8.314\text{ J/mol}\cdot\text{K}$.
Dalton's Law of Partial Pressures$P_{\text{total}} = \sum P_i = \sum \chi_i P_{\text{total}}$$V, T$Total pressure is the sum of partial pressures of all gaseous constituents.
Hesten's Learning Library Edition